Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.17■□□□□ 0.66
ERCC2P18074 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ERCC2P18074 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.17■□□□□ 0.66
ERCC2P18074 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
ERCC2P18074 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
ERCC2P18074 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.17■□□□□ 0.66
ERCC2P18074 KRT18P41-201ENST00000518924 1277 ntBASIC19.17■□□□□ 0.66
ERCC2P18074 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.17■□□□□ 0.66
ERCC2P18074 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 AC012306.2-201ENST00000609350 630 ntBASIC19.17■□□□□ 0.66
ERCC2P18074 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ERCC2P18074 MYC-208ENST00000641036 567 ntBASIC19.17■□□□□ 0.66
ERCC2P18074 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC2P18074 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.17■□□□□ 0.66
ERCC2P18074 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.16■□□□□ 0.66
ERCC2P18074 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ERCC2P18074 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.16■□□□□ 0.66
ERCC2P18074 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.16■□□□□ 0.66
ERCC2P18074 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ERCC2P18074 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ERCC2P18074 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 AC009113.1-201ENST00000570267 2443 ntBASIC19.16■□□□□ 0.66
ERCC2P18074 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
ERCC2P18074 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC2P18074 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ERCC2P18074 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC2P18074 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ERCC2P18074 AC097493.4-201ENST00000641197 219 ntBASIC19.15■□□□□ 0.66
ERCC2P18074 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC2P18074 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.15■□□□□ 0.66
ERCC2P18074 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC2P18074 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC2P18074 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC2P18074 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.14■□□□□ 0.66
ERCC2P18074 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC2P18074 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC2P18074 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms