Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 YBX1P10-201ENST00000444752 975 ntBASIC19.19■□□□□ 0.66
BRAFP15056 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 AF186192.3-201ENST00000583427 947 ntBASIC19.19■□□□□ 0.66
BRAFP15056 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 AC113410.3-201ENST00000623366 203 ntBASIC19.19■□□□□ 0.66
BRAFP15056 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.19■□□□□ 0.66
BRAFP15056 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.19■□□□□ 0.66
BRAFP15056 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
BRAFP15056 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRAFP15056 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BRAFP15056 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BRAFP15056 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.18■□□□□ 0.66
BRAFP15056 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRAFP15056 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.18■□□□□ 0.66
BRAFP15056 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.18■□□□□ 0.66
BRAFP15056 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.18■□□□□ 0.66
BRAFP15056 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRAFP15056 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BRAFP15056 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRAFP15056 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRAFP15056 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.17■□□□□ 0.66
BRAFP15056 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.17■□□□□ 0.66
BRAFP15056 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.17■□□□□ 0.66
BRAFP15056 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.17■□□□□ 0.66
BRAFP15056 KRT18P16-201ENST00000510337 1294 ntBASIC19.17■□□□□ 0.66
BRAFP15056 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.17■□□□□ 0.66
BRAFP15056 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 AC083906.6-201ENST00000641366 219 ntBASIC19.17■□□□□ 0.66
BRAFP15056 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.17■□□□□ 0.66
BRAFP15056 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.17■□□□□ 0.66
BRAFP15056 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.17■□□□□ 0.66
BRAFP15056 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRAFP15056 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRAFP15056 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.16■□□□□ 0.66
BRAFP15056 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms