Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 AC024563.2-201ENST00000603282 481 ntBASIC17.6■□□□□ 0.41
CCL4P13236 AC138894.3-201ENST00000603787 634 ntBASIC17.6■□□□□ 0.41
CCL4P13236 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL4P13236 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL4P13236 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL4P13236 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL4P13236 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL4P13236 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL4P13236 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCL4P13236 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 AC233702.3-201ENST00000578656 1387 ntBASIC17.59■□□□□ 0.41
CCL4P13236 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCL4P13236 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 AC079781.3-201ENST00000449110 356 ntBASIC17.59■□□□□ 0.41
CCL4P13236 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL4P13236 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL4P13236 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL4P13236 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL4P13236 LINC01711-201ENST00000598340 967 ntBASIC17.59■□□□□ 0.41
CCL4P13236 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL4P13236 AC104692.2-201ENST00000603054 253 ntBASIC17.59■□□□□ 0.41
CCL4P13236 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCL4P13236 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL4P13236 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CCL4P13236 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
CCL4P13236 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCL4P13236 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL4P13236 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
CCL4P13236 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCL4P13236 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL4P13236 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCL4P13236 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.58■□□□□ 0.41
CCL4P13236 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
CCL4P13236 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL4P13236 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCL4P13236 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCL4P13236 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CCL4P13236 AC124864.1-201ENST00000623408 392 ntBASIC17.58■□□□□ 0.4
CCL4P13236 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL4P13236 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL4P13236 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL4P13236 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL4P13236 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL4P13236 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.57■□□□□ 0.4
CCL4P13236 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCL4P13236 AC099336.1-202ENST00000602961 463 ntBASIC17.57■□□□□ 0.4
CCL4P13236 AL592071.1-201ENST00000611956 408 ntBASIC17.57■□□□□ 0.4
CCL4P13236 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 Z98044.1-201ENST00000632503 1764 ntBASIC17.57■□□□□ 0.4
CCL4P13236 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL4P13236 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL4P13236 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL4P13236 AFG3L1P-217ENST00000557444 2447 ntBASIC17.57■□□□□ 0.4
CCL4P13236 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
CCL4P13236 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
CCL4P13236 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 AC007952.6-201ENST00000573168 2673 ntBASIC17.56■□□□□ 0.4
CCL4P13236 AC003957.1-201ENST00000625108 2673 ntBASIC17.56■□□□□ 0.4
CCL4P13236 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 AL357033.4-201ENST00000617703 1807 ntBASIC17.56■□□□□ 0.4
CCL4P13236 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.56■□□□□ 0.4
CCL4P13236 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms