Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LINC01023-201ENST00000606054 436 ntBASIC18.77■□□□□ 0.6
MMP2P08253 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 AC141257.4-201ENST00000634557 245 ntBASIC18.77■□□□□ 0.6
MMP2P08253 AC136944.6-201ENST00000634818 245 ntBASIC18.77■□□□□ 0.6
MMP2P08253 MYC-208ENST00000641036 567 ntBASIC18.77■□□□□ 0.6
MMP2P08253 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MMP2P08253 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.77■□□□□ 0.59
MMP2P08253 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP2P08253 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP2P08253 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP2P08253 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MMP2P08253 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.76■□□□□ 0.59
MMP2P08253 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 AP000593.1-201ENST00000393668 712 ntBASIC18.76■□□□□ 0.59
MMP2P08253 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.76■□□□□ 0.59
MMP2P08253 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.76■□□□□ 0.59
MMP2P08253 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 AL512604.3-201ENST00000569583 964 ntBASIC18.76■□□□□ 0.59
MMP2P08253 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 AC005363.2-201ENST00000618631 242 ntBASIC18.76■□□□□ 0.59
MMP2P08253 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
MMP2P08253 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP2P08253 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP2P08253 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 AC090164.3-201ENST00000610780 2143 ntBASIC18.76■□□□□ 0.59
MMP2P08253 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
MMP2P08253 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 KRT8P7-201ENST00000533003 1432 ntBASIC18.75■□□□□ 0.59
MMP2P08253 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 AC005521.1-201ENST00000393351 872 ntBASIC18.75■□□□□ 0.59
MMP2P08253 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.75■□□□□ 0.59
MMP2P08253 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.75■□□□□ 0.59
MMP2P08253 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.75■□□□□ 0.59
MMP2P08253 AC112497.1-201ENST00000624824 639 ntBASIC18.75■□□□□ 0.59
MMP2P08253 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MMP2P08253 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
MMP2P08253 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MMP2P08253 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP2P08253 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MMP2P08253 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP2P08253 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.75■□□□□ 0.59
MMP2P08253 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
MMP2P08253 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
MMP2P08253 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
MMP2P08253 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP2P08253 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
MMP2P08253 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MMP2P08253 SEC1P-202ENST00000473944 940 ntBASIC18.74■□□□□ 0.59
MMP2P08253 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MMP2P08253 AC104390.1-201ENST00000555663 520 ntBASIC18.74■□□□□ 0.59
MMP2P08253 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.74■□□□□ 0.59
MMP2P08253 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.74■□□□□ 0.59
MMP2P08253 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms