Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
RB1P06400 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.7■□□□□ 0.74
RB1P06400 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
RB1P06400 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 SLC25A1P1-201ENST00000528351 927 ntBASIC19.69■□□□□ 0.74
RB1P06400 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 AC106730.1-201ENST00000566722 1090 ntBASIC19.69■□□□□ 0.74
RB1P06400 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.69■□□□□ 0.74
RB1P06400 BNIP3P18-201ENST00000593976 575 ntBASIC19.69■□□□□ 0.74
RB1P06400 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RB1P06400 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.69■□□□□ 0.74
RB1P06400 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.69■□□□□ 0.74
RB1P06400 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.69■□□□□ 0.74
RB1P06400 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RB1P06400 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.68■□□□□ 0.74
RB1P06400 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
RB1P06400 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RB1P06400 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RB1P06400 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.68■□□□□ 0.74
RB1P06400 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.68■□□□□ 0.74
RB1P06400 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.68■□□□□ 0.74
RB1P06400 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.68■□□□□ 0.74
RB1P06400 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.68■□□□□ 0.74
RB1P06400 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RB1P06400 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.68■□□□□ 0.74
RB1P06400 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
RB1P06400 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.67■□□□□ 0.74
RB1P06400 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.67■□□□□ 0.74
RB1P06400 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
RB1P06400 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.67■□□□□ 0.74
RB1P06400 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.67■□□□□ 0.74
RB1P06400 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.67■□□□□ 0.74
RB1P06400 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.67■□□□□ 0.74
RB1P06400 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.67■□□□□ 0.74
RB1P06400 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.67■□□□□ 0.74
RB1P06400 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RB1P06400 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RB1P06400 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.66■□□□□ 0.74
RB1P06400 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.66■□□□□ 0.74
RB1P06400 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.66■□□□□ 0.74
RB1P06400 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.66■□□□□ 0.74
RB1P06400 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.66■□□□□ 0.74
RB1P06400 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms