Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDRT1O95170 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.64■□□□□ 0.25
CDRT1O95170 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDRT1O95170 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDRT1O95170 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 AL390719.1-204ENST00000412397 1219 ntBASIC16.64■□□□□ 0.25
CDRT1O95170 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.64■□□□□ 0.25
CDRT1O95170 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDRT1O95170 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 AC012317.2-201ENST00000623305 2251 ntBASIC16.64■□□□□ 0.25
CDRT1O95170 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
CDRT1O95170 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.64■□□□□ 0.25
CDRT1O95170 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CDRT1O95170 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.64■□□□□ 0.25
CDRT1O95170 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDRT1O95170 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDRT1O95170 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.63■□□□□ 0.25
CDRT1O95170 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.63■□□□□ 0.25
CDRT1O95170 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.63■□□□□ 0.25
CDRT1O95170 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 IKBKGP1-201ENST00000612193 1073 ntBASIC16.63■□□□□ 0.25
CDRT1O95170 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.63■□□□□ 0.25
CDRT1O95170 AC092437.1-201ENST00000624794 1048 ntBASIC16.63■□□□□ 0.25
CDRT1O95170 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.63■□□□□ 0.25
CDRT1O95170 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.63■□□□□ 0.25
CDRT1O95170 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDRT1O95170 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CDRT1O95170 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDRT1O95170 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDRT1O95170 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDRT1O95170 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.62■□□□□ 0.25
CDRT1O95170 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.62■□□□□ 0.25
CDRT1O95170 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.62■□□□□ 0.25
CDRT1O95170 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDRT1O95170 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.62■□□□□ 0.25
CDRT1O95170 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.62■□□□□ 0.25
CDRT1O95170 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.62■□□□□ 0.25
CDRT1O95170 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDRT1O95170 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
CDRT1O95170 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDRT1O95170 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms