Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SCAF4O95104 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.27■□□□□ 0.04
SCAF4O95104 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 AL390719.1-204ENST00000412397 1219 ntBASIC15.27■□□□□ 0.04
SCAF4O95104 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAF4O95104 AC073210.2-201ENST00000430369 194 ntBASIC15.27■□□□□ 0.04
SCAF4O95104 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAF4O95104 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAF4O95104 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.27■□□□□ 0.04
SCAF4O95104 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAF4O95104 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.27■□□□□ 0.03
SCAF4O95104 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SCAF4O95104 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.27■□□□□ 0.03
SCAF4O95104 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SCAF4O95104 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.03
SCAF4O95104 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAF4O95104 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAF4O95104 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 KRT8P8-201ENST00000434750 1448 ntBASIC15.26■□□□□ 0.03
SCAF4O95104 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SCAF4O95104 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAF4O95104 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SCAF4O95104 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAF4O95104 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SCAF4O95104 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAF4O95104 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAF4O95104 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 AC009053.2-201ENST00000563701 2365 ntBASIC15.25■□□□□ 0.03
SCAF4O95104 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.25■□□□□ 0.03
SCAF4O95104 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCAF4O95104 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAF4O95104 RNA5SP413-201ENST00000516373 109 ntBASIC15.25■□□□□ 0.03
SCAF4O95104 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCAF4O95104 AC083880.1-201ENST00000608266 535 ntBASIC15.25■□□□□ 0.03
SCAF4O95104 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms