Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
BEST1O76090 AC079602.3-201ENST00000623931 403 ntBASIC19.58■□□□□ 0.72
BEST1O76090 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.58■□□□□ 0.72
BEST1O76090 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
BEST1O76090 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BEST1O76090 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST1O76090 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.72
BEST1O76090 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST1O76090 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BEST1O76090 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.57■□□□□ 0.72
BEST1O76090 ANO7L1-203ENST00000602586 1720 ntBASIC19.57■□□□□ 0.72
BEST1O76090 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.57■□□□□ 0.72
BEST1O76090 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.57■□□□□ 0.72
BEST1O76090 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.57■□□□□ 0.72
BEST1O76090 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.57■□□□□ 0.72
BEST1O76090 MIR3917-201ENST00000580971 93 ntBASIC19.57■□□□□ 0.72
BEST1O76090 AC010240.3-201ENST00000607688 395 ntBASIC19.57■□□□□ 0.72
BEST1O76090 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.57■□□□□ 0.72
BEST1O76090 AL031598.1-201ENST00000561511 1773 ntBASIC19.57■□□□□ 0.72
BEST1O76090 AC093525.10-201ENST00000625130 1569 ntBASIC19.57■□□□□ 0.72
BEST1O76090 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST1O76090 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BEST1O76090 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.56■□□□□ 0.72
BEST1O76090 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.56■□□□□ 0.72
BEST1O76090 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST1O76090 AL671277.2-201ENST00000458060 996 ntBASIC19.56■□□□□ 0.72
BEST1O76090 KRT18P41-201ENST00000518924 1277 ntBASIC19.56■□□□□ 0.72
BEST1O76090 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.56■□□□□ 0.72
BEST1O76090 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.56■□□□□ 0.72
BEST1O76090 AC083849.1-201ENST00000615227 514 ntBASIC19.56■□□□□ 0.72
BEST1O76090 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
BEST1O76090 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BEST1O76090 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST1O76090 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BEST1O76090 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.56■□□□□ 0.72
BEST1O76090 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.55■□□□□ 0.72
BEST1O76090 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
BEST1O76090 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
BEST1O76090 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
BEST1O76090 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.55■□□□□ 0.72
BEST1O76090 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.55■□□□□ 0.72
BEST1O76090 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
BEST1O76090 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
BEST1O76090 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 AC005082.1-201ENST00000413042 2259 ntBASIC19.55■□□□□ 0.72
BEST1O76090 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
BEST1O76090 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BEST1O76090 BX323043.1-201ENST00000641006 1765 ntBASIC19.55■□□□□ 0.72
BEST1O76090 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 AC093503.3-201ENST00000624917 2352 ntBASIC19.54■□□□□ 0.72
BEST1O76090 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
BEST1O76090 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.54■□□□□ 0.72
BEST1O76090 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.54■□□□□ 0.72
BEST1O76090 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
BEST1O76090 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BEST1O76090 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
BEST1O76090 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
BEST1O76090 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.54■□□□□ 0.72
BEST1O76090 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
BEST1O76090 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
BEST1O76090 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BEST1O76090 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms