Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDKL5O76039 AC009113.1-201ENST00000570267 2443 ntBASIC21.69■■□□□ 1.06
CDKL5O76039 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKL5O76039 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDKL5O76039 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDKL5O76039 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.69■■□□□ 1.06
CDKL5O76039 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDKL5O76039 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.69■■□□□ 1.06
CDKL5O76039 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDKL5O76039 TSPY14P-201ENST00000303979 915 ntBASIC21.68■■□□□ 1.06
CDKL5O76039 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.68■■□□□ 1.06
CDKL5O76039 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CDKL5O76039 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKL5O76039 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKL5O76039 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDKL5O76039 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.68■■□□□ 1.06
CDKL5O76039 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
CDKL5O76039 AC034236.2-201ENST00000606662 1610 ntBASIC21.68■■□□□ 1.06
CDKL5O76039 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.68■■□□□ 1.06
CDKL5O76039 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKL5O76039 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CDKL5O76039 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
CDKL5O76039 AP000593.1-201ENST00000393668 712 ntBASIC21.67■■□□□ 1.06
CDKL5O76039 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.67■■□□□ 1.06
CDKL5O76039 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 EGLN1P1-201ENST00000531623 762 ntBASIC21.67■■□□□ 1.06
CDKL5O76039 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.67■■□□□ 1.06
CDKL5O76039 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.67■■□□□ 1.06
CDKL5O76039 AC010653.2-201ENST00000623505 997 ntBASIC21.67■■□□□ 1.06
CDKL5O76039 AC066615.1-201ENST00000640911 628 ntBASIC21.67■■□□□ 1.06
CDKL5O76039 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
CDKL5O76039 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDKL5O76039 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.67■■□□□ 1.06
CDKL5O76039 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.66■■□□□ 1.06
CDKL5O76039 AC104581.1-202ENST00000635932 2618 ntBASIC21.66■■□□□ 1.06
CDKL5O76039 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.66■■□□□ 1.06
CDKL5O76039 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDKL5O76039 MMP23A-201ENST00000234610 1017 ntBASIC21.66■■□□□ 1.06
CDKL5O76039 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.66■■□□□ 1.06
CDKL5O76039 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.66■■□□□ 1.06
CDKL5O76039 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.66■■□□□ 1.06
CDKL5O76039 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.66■■□□□ 1.06
CDKL5O76039 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKL5O76039 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CDKL5O76039 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDKL5O76039 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL5O76039 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL5O76039 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 AL596275.1-201ENST00000423464 877 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL5O76039 AC007663.1-201ENST00000438948 1240 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 TSPY15P-201ENST00000457163 923 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 AC128688.1-201ENST00000487626 519 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.65■■□□□ 1.06
CDKL5O76039 NAPSB-206ENST00000562112 1266 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKL5O76039 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms