Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN1O60925 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN1O60925 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PFDN1O60925 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PFDN1O60925 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.71■□□□□ 0.27
PFDN1O60925 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PFDN1O60925 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PFDN1O60925 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN1O60925 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN1O60925 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN1O60925 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
PFDN1O60925 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN1O60925 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.71■□□□□ 0.26
PFDN1O60925 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PFDN1O60925 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 AL023806.1-201ENST00000603994 1649 ntBASIC16.7■□□□□ 0.26
PFDN1O60925 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PFDN1O60925 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.7■□□□□ 0.26
PFDN1O60925 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 AC019171.1-201ENST00000601251 1056 ntBASIC16.7■□□□□ 0.26
PFDN1O60925 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 AC007326.2-201ENST00000624224 7579 ntBASIC16.7■□□□□ 0.26
PFDN1O60925 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
PFDN1O60925 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.7■□□□□ 0.26
PFDN1O60925 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PFDN1O60925 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PFDN1O60925 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN1O60925 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PFDN1O60925 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 LINC02228-204ENST00000642115 2962 ntBASIC16.69■□□□□ 0.26
PFDN1O60925 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
PFDN1O60925 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 PCDHA14-201ENST00000506751 2298 ntBASIC16.69■□□□□ 0.26
PFDN1O60925 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PFDN1O60925 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms