Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 GPAT2P1-201ENST00000444924 1672 ntBASIC18.47■□□□□ 0.55
PCDHGA12O60330 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA12O60330 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PCDHGA12O60330 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 AC004870.1-201ENST00000315132 882 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 FAAHP1-202ENST00000446499 1238 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 MIR3180-1-201ENST00000580374 94 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 MIR3180-3-201ENST00000584616 94 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 AC024243.1-201ENST00000609234 778 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 AC093484.2-201ENST00000580996 2166 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA12O60330 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA12O60330 ZNF815P-204ENST00000434898 1737 ntBASIC18.46■□□□□ 0.55
PCDHGA12O60330 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 AC246785.2-201ENST00000432512 513 ntBASIC18.45■□□□□ 0.54
PCDHGA12O60330 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.45■□□□□ 0.54
PCDHGA12O60330 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA12O60330 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA12O60330 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms