Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 AL160286.2-201ENST00000567150 934 ntBASIC17.13■□□□□ 0.33
IDH3BO43837 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 AC004264.1-201ENST00000608354 794 ntBASIC17.13■□□□□ 0.33
IDH3BO43837 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 AC083906.6-201ENST00000641366 219 ntBASIC17.13■□□□□ 0.33
IDH3BO43837 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IDH3BO43837 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IDH3BO43837 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 NBPF21P-201ENST00000425093 1451 ntBASIC17.12■□□□□ 0.33
IDH3BO43837 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3BO43837 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.12■□□□□ 0.33
IDH3BO43837 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3BO43837 UNC93B5-201ENST00000530315 699 ntBASIC17.12■□□□□ 0.33
IDH3BO43837 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.12■□□□□ 0.33
IDH3BO43837 AC124067.4-201ENST00000519691 2379 ntBASIC17.12■□□□□ 0.33
IDH3BO43837 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.12■□□□□ 0.33
IDH3BO43837 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3BO43837 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3BO43837 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
IDH3BO43837 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IDH3BO43837 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IDH3BO43837 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3BO43837 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3BO43837 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3BO43837 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.11■□□□□ 0.33
IDH3BO43837 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 C1QL1P1-201ENST00000568105 661 ntBASIC17.11■□□□□ 0.33
IDH3BO43837 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
IDH3BO43837 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
IDH3BO43837 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
IDH3BO43837 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IDH3BO43837 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IDH3BO43837 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IDH3BO43837 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IDH3BO43837 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IDH3BO43837 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.1■□□□□ 0.33
IDH3BO43837 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IDH3BO43837 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.1■□□□□ 0.33
IDH3BO43837 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.1■□□□□ 0.33
IDH3BO43837 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.1■□□□□ 0.33
IDH3BO43837 AC104771.1-201ENST00000603335 964 ntBASIC17.1■□□□□ 0.33
IDH3BO43837 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms