Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.61■□□□□ 0.25
TRAF3IP2O43734 KRT18P41-201ENST00000518924 1277 ntBASIC16.61■□□□□ 0.25
TRAF3IP2O43734 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CR769767.2-201ENST00000622735 460 ntBASIC16.61■□□□□ 0.25
TRAF3IP2O43734 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC126763.1-201ENST00000552015 2118 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC005082.1-201ENST00000413042 2259 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC087499.1-201ENST00000418141 1075 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC128688.1-201ENST00000487626 519 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 WWOX-216ENST00000569818 525 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 FAM87A-204ENST00000613235 858 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 AC112777.1-201ENST00000540175 1423 ntBASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP2O43734 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 MYC-208ENST00000641036 567 ntBASIC16.59■□□□□ 0.25
TRAF3IP2O43734 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AC034236.2-201ENST00000606662 1610 ntBASIC16.59■□□□□ 0.25
TRAF3IP2O43734 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 AC073592.3-201ENST00000625118 1834 ntBASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP2O43734 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAF3IP2O43734 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms