Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTL8CO15255 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTL8CO15255 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTL8CO15255 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RTL8CO15255 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTL8CO15255 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RTL8CO15255 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RTL8CO15255 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 KRT18P23-201ENST00000435622 1283 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RTL8CO15255 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.41□□□□□ -0.42
RTL8CO15255 Z69720.1-201ENST00000601483 472 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 AC010240.3-201ENST00000607688 395 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 AC117500.6-201ENST00000624871 588 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 AF228730.7-201ENST00000641842 219 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.41□□□□□ -0.42
RTL8CO15255 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTL8CO15255 LINC01521-201ENST00000504184 1943 ntBASIC12.41□□□□□ -0.42
RTL8CO15255 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.41□□□□□ -0.42
RTL8CO15255 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RTL8CO15255 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
RTL8CO15255 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 IGHV3-47-201ENST00000425060 335 ntBASIC12.4□□□□□ -0.42
RTL8CO15255 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 PMS2P1-201ENST00000431037 1228 ntBASIC12.4□□□□□ -0.42
RTL8CO15255 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 SAPCD2P3-201ENST00000455031 850 ntBASIC12.4□□□□□ -0.42
RTL8CO15255 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.4□□□□□ -0.42
RTL8CO15255 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 AC104390.1-201ENST00000555663 520 ntBASIC12.4□□□□□ -0.42
RTL8CO15255 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.4□□□□□ -0.42
RTL8CO15255 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.4□□□□□ -0.42
RTL8CO15255 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 MED17-221ENST00000639724 2317 ntTSL 5 BASIC12.4□□□□□ -0.42
RTL8CO15255 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.4□□□□□ -0.42
RTL8CO15255 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.4□□□□□ -0.42
RTL8CO15255 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTL8CO15255 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RTL8CO15255 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RTL8CO15255 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
RTL8CO15255 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTL8CO15255 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.39□□□□□ -0.43
RTL8CO15255 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTL8CO15255 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTL8CO15255 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.39□□□□□ -0.43
RTL8CO15255 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.39□□□□□ -0.43
RTL8CO15255 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RTL8CO15255 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms