Protein–RNA interactions for Protein: A6NIV6

LRRIQ4, Leucine-rich repeat and IQ domain-containing protein 4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRIQ4A6NIV6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 SPDYE15P-201ENST00000424157 909 ntBASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRRIQ4A6NIV6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRIQ4A6NIV6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRIQ4A6NIV6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
LRRIQ4A6NIV6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRIQ4A6NIV6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 STARP1-201ENST00000397973 869 ntBASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 AC034232.1-201ENST00000506026 1064 ntBASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 MYC-208ENST00000641036 567 ntBASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 HOXB1-202ENST00000577092 1414 ntBASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRIQ4A6NIV6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 KRT8P7-201ENST00000533003 1432 ntBASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
LRRIQ4A6NIV6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AC112907.2-201ENST00000448639 330 ntBASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AL671277.2-201ENST00000458060 996 ntBASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 RASA4DP-201ENST00000460726 1199 ntBASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRIQ4A6NIV6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRIQ4A6NIV6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRIQ4A6NIV6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms