Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 AC233702.5-201ENST00000584107 538 ntBASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 AL049637.2-201ENST00000641778 930 ntBASIC20.58■□□□□ 0.89
TRIM49BA6NDI0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM49BA6NDI0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 AC012618.2-201ENST00000428058 849 ntBASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 Z99916.2-201ENST00000604037 246 ntBASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 GPAT2P1-201ENST00000444924 1672 ntBASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM49BA6NDI0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 ABALON-201ENST00000629058 1903 ntBASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 AC099343.3-201ENST00000605834 2503 ntBASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM49BA6NDI0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 AL023284.2-201ENST00000405850 579 ntBASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 AC097488.1-201ENST00000507834 756 ntBASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 DGCR10-201ENST00000609839 495 ntBASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 AC135776.1-201ENST00000319817 2481 ntBASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 AC026471.1-201ENST00000564629 3026 ntBASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM49BA6NDI0 AL109659.2-201ENST00000606809 1674 ntBASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms