Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 AL109659.2-201ENST00000606809 1674 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC008556.1-201ENST00000610908 2040 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 FAM8A6P-201ENST00000407496 1135 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 AL359075.1-203ENST00000462729 1002 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 GCSHP2-201ENST00000560971 527 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 KRT8P32-201ENST00000512863 1461 ntBASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IGHV4-28A0A0C4DH34 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC024243.1-201ENST00000609234 778 ntBASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 BCL2-203ENST00000589955 5011 ntBASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
IGHV4-28A0A0C4DH34 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IGHV4-28A0A0C4DH34 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IGHV4-28A0A0C4DH34 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms