Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-6A0A0B4J262 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 AC068418.2-201ENST00000577309 3703 ntBASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 BX119927.1-201ENST00000636596 1552 ntBASIC13.75□□□□□ -0.21
TRAV8-6A0A0B4J262 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-6A0A0B4J262 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms