Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.45■□□□□ 0.86
SCN10AQ9Y5Y9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 NUS1P2-201ENST00000417358 873 ntBASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 AC113404.2-201ENST00000507884 177 ntBASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SCN10AQ9Y5Y9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN10AQ9Y5Y9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 AL773604.1-201ENST00000617417 272 ntBASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN10AQ9Y5Y9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms