Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 LINC01023-201ENST00000606054 436 ntBASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 CD177P1-201ENST00000606252 935 ntBASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 AC026471.5-201ENST00000615068 467 ntBASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGB3Q9Y5G1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 AL355355.2-201ENST00000442321 338 ntBASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHGB3Q9Y5G1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 AL354751.1-201ENST00000412768 1863 ntBASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGB3Q9Y5G1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 AC018470.1-201ENST00000624790 3129 ntBASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGB3Q9Y5G1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms