Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 LINC01568-207ENST00000641790 1380 ntBASIC18.75■□□□□ 0.59
PKP3Q9Y446 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PKP3Q9Y446 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PKP3Q9Y446 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 AL031598.1-201ENST00000561511 1773 ntBASIC18.74■□□□□ 0.59
PKP3Q9Y446 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.74■□□□□ 0.59
PKP3Q9Y446 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.74■□□□□ 0.59
PKP3Q9Y446 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 AC008556.1-201ENST00000610908 2040 ntBASIC18.74■□□□□ 0.59
PKP3Q9Y446 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.74■□□□□ 0.59
PKP3Q9Y446 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PKP3Q9Y446 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 MTMR9LP-203ENST00000426597 1545 ntBASIC18.73■□□□□ 0.59
PKP3Q9Y446 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.73■□□□□ 0.59
PKP3Q9Y446 KRT18P22-201ENST00000402024 1347 ntBASIC18.73■□□□□ 0.59
PKP3Q9Y446 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PKP3Q9Y446 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms