Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 BX842568.4-201ENST00000421222 227 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 AC132008.2-207ENST00000454517 770 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 AC073648.2-201ENST00000510116 352 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 AC096582.2-201ENST00000510860 516 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 AC008608.2-201ENST00000606089 416 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 AL137060.1-201ENST00000618151 2648 ntBASIC21.26■□□□□ 0.99
CPA4Q9UI42 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPA4Q9UI42 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.26■□□□□ 0.99
CPA4Q9UI42 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 MIR7706-201ENST00000613747 67 ntBASIC21.25■□□□□ 0.99
CPA4Q9UI42 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPA4Q9UI42 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CPA4Q9UI42 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 FAM220CP-201ENST00000395253 831 ntBASIC21.24■□□□□ 0.99
CPA4Q9UI42 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPA4Q9UI42 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CPA4Q9UI42 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 AC018712.1-201ENST00000455767 687 ntBASIC21.23■□□□□ 0.99
CPA4Q9UI42 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CPA4Q9UI42 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPA4Q9UI42 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms