Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CALCOCO1Q9P1Z2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.37■□□□□ 0.85
CALCOCO1Q9P1Z2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.37■□□□□ 0.85
CALCOCO1Q9P1Z2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 LINC01023-201ENST00000606054 436 ntBASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CALCOCO1Q9P1Z2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 MIR4785-201ENST00000585005 73 ntBASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 AC113410.3-201ENST00000623366 203 ntBASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.35■□□□□ 0.85
CALCOCO1Q9P1Z2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 FAM210CP-201ENST00000445714 574 ntBASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.34■□□□□ 0.85
CALCOCO1Q9P1Z2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 RARRES2P10-201ENST00000564312 460 ntBASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.33■□□□□ 0.85
CALCOCO1Q9P1Z2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALCOCO1Q9P1Z2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALCOCO1Q9P1Z2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CALCOCO1Q9P1Z2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CALCOCO1Q9P1Z2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms