Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HCFC1R1Q9NWW0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.39■□□□□ 0.7
HCFC1R1Q9NWW0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AC079781.3-201ENST00000449110 356 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AC074051.2-201ENST00000565115 352 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AC090616.6-201ENST00000582640 721 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 GPR32P1-201ENST00000601788 811 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AC138894.3-201ENST00000603787 634 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AL121772.3-201ENST00000610840 674 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
HCFC1R1Q9NWW0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 AC104819.1-201ENST00000504587 486 ntBASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 KRT18P31-201ENST00000506277 1292 ntBASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1R1Q9NWW0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 AC233702.3-201ENST00000578656 1387 ntBASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 IGHGP-201ENST00000390555 1178 ntBASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 AC104692.2-201ENST00000603054 253 ntBASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1R1Q9NWW0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 AC007952.6-201ENST00000573168 2673 ntBASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 AC003957.1-201ENST00000625108 2673 ntBASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1R1Q9NWW0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1R1Q9NWW0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms