Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 LINC00265-3P-201ENST00000447588 903 ntBASIC22.03■■□□□ 1.12
DDX4Q9NQI0 TOB2P1-201ENST00000469761 992 ntBASIC22.03■■□□□ 1.12
DDX4Q9NQI0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
DDX4Q9NQI0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 NUS1P1-201ENST00000446295 882 ntBASIC22.02■■□□□ 1.12
DDX4Q9NQI0 AP000867.3-201ENST00000524675 377 ntBASIC22.02■■□□□ 1.12
DDX4Q9NQI0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 AL732292.2-201ENST00000609649 430 ntBASIC22.02■■□□□ 1.12
DDX4Q9NQI0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX4Q9NQI0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
DDX4Q9NQI0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 AL845331.1-201ENST00000424978 1190 ntBASIC22.01■■□□□ 1.11
DDX4Q9NQI0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX4Q9NQI0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX4Q9NQI0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX4Q9NQI0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
DDX4Q9NQI0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX4Q9NQI0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22■■□□□ 1.11
DDX4Q9NQI0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX4Q9NQI0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
DDX4Q9NQI0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
DDX4Q9NQI0 IGHGP-201ENST00000390555 1178 ntBASIC22■■□□□ 1.11
DDX4Q9NQI0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22■■□□□ 1.11
DDX4Q9NQI0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22■■□□□ 1.11
DDX4Q9NQI0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
DDX4Q9NQI0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX4Q9NQI0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
DDX4Q9NQI0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX4Q9NQI0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX4Q9NQI0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX4Q9NQI0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms