Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.52□□□□□ -0.4
SND1-IT1Q9HBX3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AL512625.2-201ENST00000417533 625 ntBASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AC083906.6-201ENST00000641366 219 ntBASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ESPNP-201ENST00000270691 2015 ntBASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.52□□□□□ -0.41
SND1-IT1Q9HBX3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 AC093787.1-201ENST00000450396 207 ntBASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 GNAS-203ENST00000306120 1878 ntBASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SND1-IT1Q9HBX3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SND1-IT1Q9HBX3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms