Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COG4Q9H9E3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COG4Q9H9E3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.84■□□□□ 0.61
COG4Q9H9E3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.83■□□□□ 0.61
COG4Q9H9E3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
COG4Q9H9E3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COG4Q9H9E3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 AC008040.2-201ENST00000461049 708 ntBASIC18.83■□□□□ 0.6
COG4Q9H9E3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 AL355075.4-201ENST00000554988 638 ntBASIC18.83■□□□□ 0.6
COG4Q9H9E3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COG4Q9H9E3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COG4Q9H9E3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.83■□□□□ 0.6
COG4Q9H9E3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COG4Q9H9E3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.82■□□□□ 0.6
COG4Q9H9E3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COG4Q9H9E3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 AL512353.2-201ENST00000448759 1962 ntBASIC18.81■□□□□ 0.6
COG4Q9H9E3 BCL2-203ENST00000589955 5011 ntBASIC18.81■□□□□ 0.6
COG4Q9H9E3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 FAM207BP-201ENST00000447172 505 ntBASIC18.81■□□□□ 0.6
COG4Q9H9E3 RBM17P1-201ENST00000453646 1190 ntBASIC18.81■□□□□ 0.6
COG4Q9H9E3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 DGCR10-201ENST00000609839 495 ntBASIC18.81■□□□□ 0.6
COG4Q9H9E3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COG4Q9H9E3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.81■□□□□ 0.6
COG4Q9H9E3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 AP000692.2-201ENST00000608391 879 ntBASIC18.8■□□□□ 0.6
COG4Q9H9E3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COG4Q9H9E3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COG4Q9H9E3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms