Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX47Q9H0S4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 POM121L13P-201ENST00000422362 380 ntBASIC19.47■□□□□ 0.71
DDX47Q9H0S4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 UNC93B4-201ENST00000505679 747 ntBASIC19.47■□□□□ 0.71
DDX47Q9H0S4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 PRKY-204ENST00000533551 1019 ntBASIC19.47■□□□□ 0.71
DDX47Q9H0S4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
DDX47Q9H0S4 AC134043.2-201ENST00000624206 2238 ntBASIC19.47■□□□□ 0.71
DDX47Q9H0S4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 KRT8P32-201ENST00000512863 1461 ntBASIC19.46■□□□□ 0.71
DDX47Q9H0S4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DDX47Q9H0S4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 Z85996.1-201ENST00000494644 937 ntBASIC19.45■□□□□ 0.7
DDX47Q9H0S4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms