Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 AL136038.4-201ENST00000603606 1261 ntBASIC19.34■□□□□ 0.69
RNF38Q9H0F5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF38Q9H0F5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RNF38Q9H0F5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 MTMR9LP-203ENST00000426597 1545 ntBASIC19.33■□□□□ 0.68
RNF38Q9H0F5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF38Q9H0F5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AL162741.1-201ENST00000565563 1558 ntBASIC19.32■□□□□ 0.68
RNF38Q9H0F5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 Z98044.1-201ENST00000632503 1764 ntBASIC19.32■□□□□ 0.68
RNF38Q9H0F5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AC011498.5-201ENST00000592027 486 ntBASIC19.32■□□□□ 0.68
RNF38Q9H0F5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.32■□□□□ 0.68
RNF38Q9H0F5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RNF38Q9H0F5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.31■□□□□ 0.68
RNF38Q9H0F5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 MIR662-201ENST00000384847 95 ntBASIC19.31■□□□□ 0.68
RNF38Q9H0F5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF38Q9H0F5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms