Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB40CQ96S21 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB40CQ96S21 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 AC135776.1-201ENST00000319817 2481 ntBASIC15.15■□□□□ 0.02
RAB40CQ96S21 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.15■□□□□ 0.02
RAB40CQ96S21 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40CQ96S21 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40CQ96S21 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 AC006557.6-201ENST00000623071 864 ntBASIC15.14■□□□□ 0.01
RAB40CQ96S21 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40CQ96S21 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40CQ96S21 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms