Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MCCD1P1-208ENST00000445732 328 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC092933.1-201ENST00000393644 945 ntBASIC5.68□□□□□ -1.5
HMCN1Q96RW7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMCN1Q96RW7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GPR89P-201ENST00000407924 1495 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 LINC02560-201ENST00000596379 459 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 INTS4P1-201ENST00000438455 1935 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 RCN1P2-201ENST00000398357 915 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC113404.2-201ENST00000507884 177 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AL512356.2-201ENST00000546955 174 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC091812.2-201ENST00000619081 385 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 BCYRN1-201ENST00000418539 200 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 GATB-205ENST00000508611 605 ntTSL 2 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC105339.1-204ENST00000636249 355 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 AC080038.3-201ENST00000623346 1952 ntBASIC5.67□□□□□ -1.5
HMCN1Q96RW7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMCN1Q96RW7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms