Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 PP12613-201ENST00000424958 2230 ntBASIC17.61■□□□□ 0.41
NR1H4Q96RI1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NR1H4Q96RI1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 AL358852.1-201ENST00000623174 1268 ntBASIC17.6■□□□□ 0.41
NR1H4Q96RI1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 AP001094.4-201ENST00000579008 2176 ntBASIC17.6■□□□□ 0.41
NR1H4Q96RI1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NR1H4Q96RI1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 AC079140.4-201ENST00000507448 529 ntBASIC17.59■□□□□ 0.41
NR1H4Q96RI1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NR1H4Q96RI1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H4Q96RI1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 TPRG1LP1-201ENST00000598702 760 ntBASIC17.58■□□□□ 0.4
NR1H4Q96RI1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 AC005837.3-201ENST00000612163 286 ntBASIC17.58■□□□□ 0.4
NR1H4Q96RI1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H4Q96RI1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms