Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX3Q96PT4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX3Q96PT4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DUX3Q96PT4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX3Q96PT4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX3Q96PT4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX3Q96PT4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX3Q96PT4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX3Q96PT4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX3Q96PT4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
DUX3Q96PT4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.52□□□□□ -0.08
DUX3Q96PT4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
DUX3Q96PT4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX3Q96PT4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 AL031133.1-201ENST00000406807 723 ntBASIC14.52□□□□□ -0.09
DUX3Q96PT4 FAM8A6P-201ENST00000407496 1135 ntBASIC14.52□□□□□ -0.09
DUX3Q96PT4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
DUX3Q96PT4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX3Q96PT4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 AL023284.2-201ENST00000405850 579 ntBASIC14.51□□□□□ -0.09
DUX3Q96PT4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 AL031432.5-201ENST00000641059 760 ntBASIC14.51□□□□□ -0.09
DUX3Q96PT4 OR6D1P-202ENST00000641007 5290 ntBASIC14.51□□□□□ -0.09
DUX3Q96PT4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX3Q96PT4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX3Q96PT4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 AC093484.2-201ENST00000580996 2166 ntBASIC14.5□□□□□ -0.09
DUX3Q96PT4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.5□□□□□ -0.09
DUX3Q96PT4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DUX3Q96PT4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms