Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.68■□□□□ 0.42
COL21A1Q96P44 AC090164.3-201ENST00000610780 2143 ntBASIC17.68■□□□□ 0.42
COL21A1Q96P44 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.68■□□□□ 0.42
COL21A1Q96P44 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL21A1Q96P44 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL21A1Q96P44 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AL596275.1-201ENST00000423464 877 ntBASIC17.67■□□□□ 0.42
COL21A1Q96P44 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AC011506.1-201ENST00000474329 610 ntBASIC17.67■□□□□ 0.42
COL21A1Q96P44 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 AC130371.2-201ENST00000619443 611 ntBASIC17.67■□□□□ 0.42
COL21A1Q96P44 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL21A1Q96P44 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COL21A1Q96P44 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 AC091390.4-202ENST00000476426 537 ntBASIC17.66■□□□□ 0.42
COL21A1Q96P44 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 REXO1L10P-201ENST00000615707 1290 ntBASIC17.66■□□□□ 0.42
COL21A1Q96P44 REXO1L12P-201ENST00000622156 912 ntBASIC17.66■□□□□ 0.42
COL21A1Q96P44 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.66■□□□□ 0.42
COL21A1Q96P44 AC018470.1-201ENST00000624790 3129 ntBASIC17.66■□□□□ 0.42
COL21A1Q96P44 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
COL21A1Q96P44 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL21A1Q96P44 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 MESTP1-201ENST00000404287 994 ntBASIC17.65■□□□□ 0.42
COL21A1Q96P44 TSPY23P-201ENST00000440136 739 ntBASIC17.65■□□□□ 0.42
COL21A1Q96P44 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 AC083906.6-201ENST00000641366 219 ntBASIC17.65■□□□□ 0.42
COL21A1Q96P44 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL21A1Q96P44 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.65■□□□□ 0.42
COL21A1Q96P44 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 FAM207BP-201ENST00000447172 505 ntBASIC17.64■□□□□ 0.41
COL21A1Q96P44 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms