Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 MCCD1P1-208ENST00000445732 328 ntBASIC20.8■□□□□ 0.92
SCLT1Q96NL6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCLT1Q96NL6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 AL023284.2-201ENST00000405850 579 ntBASIC20.79■□□□□ 0.92
SCLT1Q96NL6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCLT1Q96NL6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 AC018445.3-201ENST00000624177 1945 ntBASIC20.78■□□□□ 0.92
SCLT1Q96NL6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 TEX21P-204ENST00000641479 1693 ntBASIC20.78■□□□□ 0.92
SCLT1Q96NL6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 GCSHP2-201ENST00000560971 527 ntBASIC20.78■□□□□ 0.92
SCLT1Q96NL6 AL358472.4-201ENST00000633140 710 ntBASIC20.78■□□□□ 0.92
SCLT1Q96NL6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCLT1Q96NL6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AL031133.1-201ENST00000406807 723 ntBASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AL671277.2-201ENST00000458060 996 ntBASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 MYC-208ENST00000641036 567 ntBASIC20.77■□□□□ 0.92
SCLT1Q96NL6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCLT1Q96NL6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.77■□□□□ 0.91
SCLT1Q96NL6 KRT8P3-201ENST00000519669 1449 ntBASIC20.77■□□□□ 0.91
SCLT1Q96NL6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCLT1Q96NL6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCLT1Q96NL6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCLT1Q96NL6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.76■□□□□ 0.91
SCLT1Q96NL6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms