Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
TIMD4Q96H15 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMD4Q96H15 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TIMD4Q96H15 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TIMD4Q96H15 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TIMD4Q96H15 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TIMD4Q96H15 AC020763.4-201ENST00000623414 4170 ntBASIC15.71■□□□□ 0.1
TIMD4Q96H15 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 STARP1-201ENST00000397973 869 ntBASIC15.7■□□□□ 0.1
TIMD4Q96H15 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AL671277.2-201ENST00000458060 996 ntBASIC15.7■□□□□ 0.1
TIMD4Q96H15 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AC091076.1-201ENST00000610741 619 ntBASIC15.7■□□□□ 0.1
TIMD4Q96H15 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 AC093484.2-201ENST00000580996 2166 ntBASIC15.7■□□□□ 0.1
TIMD4Q96H15 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMD4Q96H15 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMD4Q96H15 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AC073130.3-201ENST00000624389 2278 ntBASIC15.69■□□□□ 0.1
TIMD4Q96H15 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AC024243.1-201ENST00000609234 778 ntBASIC15.69■□□□□ 0.1
TIMD4Q96H15 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.69■□□□□ 0.1
TIMD4Q96H15 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 AL121956.5-201ENST00000625261 221 ntBASIC15.69■□□□□ 0.1
TIMD4Q96H15 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMD4Q96H15 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TIMD4Q96H15 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TIMD4Q96H15 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMD4Q96H15 KRT8P32-201ENST00000512863 1461 ntBASIC15.68■□□□□ 0.1
TIMD4Q96H15 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms