Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.13■□□□□ 0.97
USP6NLQ92738 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.13■□□□□ 0.97
USP6NLQ92738 AC120114.3-201ENST00000611923 658 ntBASIC21.13■□□□□ 0.97
USP6NLQ92738 AC124864.1-201ENST00000623408 392 ntBASIC21.13■□□□□ 0.97
USP6NLQ92738 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP6NLQ92738 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.13■□□□□ 0.97
USP6NLQ92738 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.13■□□□□ 0.97
USP6NLQ92738 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6NLQ92738 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 Z82202.1-201ENST00000623446 1880 ntBASIC21.12■□□□□ 0.97
USP6NLQ92738 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
USP6NLQ92738 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.12■□□□□ 0.97
USP6NLQ92738 AL590627.1-203ENST00000421194 1026 ntBASIC21.12■□□□□ 0.97
USP6NLQ92738 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
USP6NLQ92738 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.12■□□□□ 0.97
USP6NLQ92738 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 AC006333.2-201ENST00000607957 2099 ntBASIC21.12■□□□□ 0.97
USP6NLQ92738 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.12■□□□□ 0.97
USP6NLQ92738 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP6NLQ92738 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6NLQ92738 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6NLQ92738 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.11■□□□□ 0.97
USP6NLQ92738 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 GUSBP12-201ENST00000513727 720 ntBASIC21.11■□□□□ 0.97
USP6NLQ92738 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP6NLQ92738 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.11■□□□□ 0.97
USP6NLQ92738 AC024563.2-201ENST00000603282 481 ntBASIC21.11■□□□□ 0.97
USP6NLQ92738 TP73-AS1-207ENST00000624167 988 ntBASIC21.11■□□□□ 0.97
USP6NLQ92738 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6NLQ92738 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.11■□□□□ 0.97
USP6NLQ92738 AC034236.2-201ENST00000606662 1610 ntBASIC21.11■□□□□ 0.97
USP6NLQ92738 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP6NLQ92738 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
USP6NLQ92738 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6NLQ92738 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6NLQ92738 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.1■□□□□ 0.97
USP6NLQ92738 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
USP6NLQ92738 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6NLQ92738 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.1■□□□□ 0.97
USP6NLQ92738 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP6NLQ92738 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6NLQ92738 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms