Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 NT5C-210ENST00000582160 860 ntTSL 2 BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 AL121672.3-201ENST00000608644 468 ntBASIC31.94■■■□□ 2.7
TRIM41Q8WV44 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 ABBA01031661.1-201ENST00000634362 1253 ntBASIC31.93■■■□□ 2.7
TRIM41Q8WV44 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC31.93■■■□□ 2.7
TRIM41Q8WV44 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 AL023284.2-201ENST00000405850 579 ntBASIC31.92■■■□□ 2.7
TRIM41Q8WV44 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 AP001005.1-201ENST00000571755 1248 ntBASIC31.92■■■□□ 2.7
TRIM41Q8WV44 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 FGF14-AS2-201ENST00000606448 1074 ntBASIC31.92■■■□□ 2.7
TRIM41Q8WV44 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
TRIM41Q8WV44 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 STARP1-201ENST00000397973 869 ntBASIC31.91■■■□□ 2.7
TRIM41Q8WV44 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 TPSP2-201ENST00000561760 610 ntBASIC31.91■■■□□ 2.7
TRIM41Q8WV44 AC106730.1-201ENST00000566722 1090 ntBASIC31.91■■■□□ 2.7
TRIM41Q8WV44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC31.91■■■□□ 2.7
TRIM41Q8WV44 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 Telomerase-vert.1-201ENST00000363312 438 ntBASIC31.9■■■□□ 2.7
TRIM41Q8WV44 FAM8A3P-201ENST00000427218 844 ntBASIC31.9■■■□□ 2.7
TRIM41Q8WV44 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 IL11-204ENST00000590625 1028 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 FP475955.4-201ENST00000623131 1990 ntBASIC31.9■■■□□ 2.7
TRIM41Q8WV44 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM41Q8WV44 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 RNA5SP419-201ENST00000515908 135 ntBASIC31.89■■■□□ 2.7
TRIM41Q8WV44 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM41Q8WV44 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
TRIM41Q8WV44 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM41Q8WV44 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms