Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 AL139288.1-201ENST00000623748 933 ntBASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 AC073314.1-201ENST00000568729 2216 ntBASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
COL22A1Q8NFW1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 AC007967.2-201ENST00000432613 625 ntBASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 MIR3687-2-201ENST00000577708 61 ntBASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 MIR3687-1-201ENST00000614492 61 ntBASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 AP005117.1-201ENST00000584346 1413 ntBASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL22A1Q8NFW1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 LBH-203ENST00000404397 543 ntTSL 4 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 RNA5SP416-201ENST00000516838 111 ntBASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AC083906.6-201ENST00000641366 219 ntBASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AC079781.4-201ENST00000641908 219 ntBASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL22A1Q8NFW1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL22A1Q8NFW1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.89■■□□□ 1.58
COL22A1Q8NFW1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL22A1Q8NFW1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COL22A1Q8NFW1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.87■■□□□ 1.57
COL22A1Q8NFW1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 ALG1L5P-201ENST00000482043 771 ntBASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL22A1Q8NFW1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms