Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 FAM210CP-201ENST00000445714 574 ntBASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 AP000997.3-201ENST00000623333 2250 ntBASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
SIMC1Q8NDZ2 AL031598.1-201ENST00000561511 1773 ntBASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.58■□□□□ 0.41
SIMC1Q8NDZ2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 AC104581.1-202ENST00000635932 2618 ntBASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.58■□□□□ 0.4
SIMC1Q8NDZ2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 AC083906.6-201ENST00000641366 219 ntBASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.57■□□□□ 0.4
SIMC1Q8NDZ2 KRT8P32-201ENST00000512863 1461 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AL499627.1-201ENST00000569373 2188 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms