Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL27A1Q8IZC6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL27A1Q8IZC6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL27A1Q8IZC6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 AP000593.1-201ENST00000393668 712 ntBASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 KRT18P67-201ENST00000432816 1264 ntBASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 GPALPP1-207ENST00000611650 899 ntBASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 AF228730.7-201ENST00000641842 219 ntBASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL27A1Q8IZC6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 PMS2P1-201ENST00000431037 1228 ntBASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 AC079776.4-201ENST00000511039 504 ntBASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL27A1Q8IZC6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.54■□□□□ 0.4
COL27A1Q8IZC6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms