Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 AP000692.2-201ENST00000608391 879 ntBASIC17.3■□□□□ 0.36
VRK2Q86Y07 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 AL135905.2-201ENST00000584934 1404 ntBASIC17.3■□□□□ 0.36
VRK2Q86Y07 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 AC018470.1-201ENST00000624790 3129 ntBASIC17.29■□□□□ 0.36
VRK2Q86Y07 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
VRK2Q86Y07 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VRK2Q86Y07 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 UBE2SP1-201ENST00000450587 669 ntBASIC17.28■□□□□ 0.36
VRK2Q86Y07 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 AL354751.1-201ENST00000412768 1863 ntBASIC17.28■□□□□ 0.36
VRK2Q86Y07 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.28■□□□□ 0.36
VRK2Q86Y07 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VRK2Q86Y07 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VRK2Q86Y07 RPS2P55-201ENST00000397318 883 ntBASIC17.27■□□□□ 0.36
VRK2Q86Y07 AC107956.1-201ENST00000494359 873 ntBASIC17.27■□□□□ 0.36
VRK2Q86Y07 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.27■□□□□ 0.36
VRK2Q86Y07 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.27■□□□□ 0.36
VRK2Q86Y07 AC113410.3-201ENST00000623366 203 ntBASIC17.27■□□□□ 0.36
VRK2Q86Y07 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VRK2Q86Y07 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VRK2Q86Y07 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.27■□□□□ 0.36
VRK2Q86Y07 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.27■□□□□ 0.35
VRK2Q86Y07 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VRK2Q86Y07 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VRK2Q86Y07 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.26■□□□□ 0.35
VRK2Q86Y07 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VRK2Q86Y07 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK2Q86Y07 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms