Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 AL353692.3-201ENST00000407031 1396 ntBASIC19.2■□□□□ 0.66
DENND4AQ7Z401 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 FAM197Y8-203ENST00000450145 560 ntBASIC19.2■□□□□ 0.66
DENND4AQ7Z401 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 AC096582.2-201ENST00000510860 516 ntBASIC19.2■□□□□ 0.66
DENND4AQ7Z401 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.2■□□□□ 0.66
DENND4AQ7Z401 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND4AQ7Z401 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND4AQ7Z401 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 KRT8P32-201ENST00000512863 1461 ntBASIC19.17■□□□□ 0.66
DENND4AQ7Z401 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
DENND4AQ7Z401 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.16■□□□□ 0.66
DENND4AQ7Z401 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms