Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 TFP1-202ENST00000475455 1573 ntBASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1AQ71U36 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 NBPF21P-201ENST00000425093 1451 ntBASIC17.22■□□□□ 0.35
TUBA1AQ71U36 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1AQ71U36 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AP006587.1-201ENST00000534129 1502 ntBASIC17.21■□□□□ 0.35
TUBA1AQ71U36 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AC008764.6-201ENST00000595909 2069 ntBASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1AQ71U36 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms