Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 AC132008.2-207ENST00000454517 770 ntBASIC23.49■■□□□ 1.35
RC3H1Q5TC82 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 KRT18P41-201ENST00000518924 1277 ntBASIC23.49■■□□□ 1.35
RC3H1Q5TC82 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H1Q5TC82 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 AC093909.1-201ENST00000504731 1122 ntBASIC23.48■■□□□ 1.35
RC3H1Q5TC82 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 AC008608.2-201ENST00000606089 416 ntBASIC23.48■■□□□ 1.35
RC3H1Q5TC82 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RC3H1Q5TC82 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 LINC01006-201ENST00000333319 2292 ntBASIC23.47■■□□□ 1.35
RC3H1Q5TC82 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 AC112907.3-201ENST00000577781 2400 ntBASIC23.47■■□□□ 1.35
RC3H1Q5TC82 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.47■■□□□ 1.35
RC3H1Q5TC82 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H1Q5TC82 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 AL357033.4-201ENST00000617703 1807 ntBASIC23.46■■□□□ 1.35
RC3H1Q5TC82 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RC3H1Q5TC82 AL355877.3-201ENST00000622820 899 ntBASIC23.46■■□□□ 1.35
RC3H1Q5TC82 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RC3H1Q5TC82 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.45■■□□□ 1.35
RC3H1Q5TC82 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
RC3H1Q5TC82 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.45■■□□□ 1.35
RC3H1Q5TC82 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.45■■□□□ 1.34
RC3H1Q5TC82 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms