Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 AC112777.1-201ENST00000540175 1423 ntBASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 U91328.1-201ENST00000437528 223 ntBASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL13A1Q5TAT6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 CRYGEP-201ENST00000412192 528 ntBASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 RPS2P32-201ENST00000439199 892 ntBASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AL589182.2-201ENST00000619332 1049 ntBASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.92■□□□□ 0.94
COL13A1Q5TAT6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 PGM5P2-202ENST00000637225 1043 ntBASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.91■□□□□ 0.94
COL13A1Q5TAT6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.9■□□□□ 0.94
COL13A1Q5TAT6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms