Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.11■□□□□ 0.17
UBA52P62987 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 AL121829.2-201ENST00000620908 328 ntBASIC16.11■□□□□ 0.17
UBA52P62987 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.11■□□□□ 0.17
UBA52P62987 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 HTR7P1-201ENST00000538670 1336 ntBASIC16.11■□□□□ 0.17
UBA52P62987 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBA52P62987 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBA52P62987 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
UBA52P62987 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA52P62987 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 AC009237.14-201ENST00000609975 1594 ntBASIC16.1■□□□□ 0.17
UBA52P62987 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBA52P62987 AL353807.1-201ENST00000427475 662 ntBASIC16.1■□□□□ 0.17
UBA52P62987 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
UBA52P62987 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.1■□□□□ 0.17
UBA52P62987 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 AF186192.3-201ENST00000583427 947 ntBASIC16.1■□□□□ 0.17
UBA52P62987 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBA52P62987 CD177P1-201ENST00000606252 935 ntBASIC16.1■□□□□ 0.17
UBA52P62987 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 AL353708.3-201ENST00000610272 989 ntBASIC16.1■□□□□ 0.17
UBA52P62987 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.1■□□□□ 0.17
UBA52P62987 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.1■□□□□ 0.17
UBA52P62987 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA52P62987 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA52P62987 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
UBA52P62987 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA52P62987 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 MMP23A-201ENST00000234610 1017 ntBASIC16.09■□□□□ 0.17
UBA52P62987 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 KRT16P5-201ENST00000455284 522 ntBASIC16.09■□□□□ 0.17
UBA52P62987 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.09■□□□□ 0.17
UBA52P62987 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.09■□□□□ 0.17
UBA52P62987 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA52P62987 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA52P62987 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBA52P62987 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA52P62987 AL161938.1-201ENST00000569833 2180 ntBASIC16.09■□□□□ 0.17
UBA52P62987 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA52P62987 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms