Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.23□□□□□ -0.29
RPL39P62891 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL39P62891 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 GNAS-203ENST00000306120 1878 ntBASIC13.23□□□□□ -0.29
RPL39P62891 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL39P62891 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RPL39P62891 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL39P62891 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL39P62891 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.22□□□□□ -0.29
RPL39P62891 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.22□□□□□ -0.29
RPL39P62891 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL39P62891 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RPL39P62891 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL39P62891 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL39P62891 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL39P62891 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RPL39P62891 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RPL39P62891 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RPL39P62891 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RPL39P62891 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL39P62891 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
RPL39P62891 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RPL39P62891 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL39P62891 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RPL39P62891 AL121906.2-201ENST00000621597 723 ntBASIC13.21□□□□□ -0.29
RPL39P62891 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RPL39P62891 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RPL39P62891 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.21□□□□□ -0.29
RPL39P62891 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL39P62891 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RPL39P62891 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RPL39P62891 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.21□□□□□ -0.3
RPL39P62891 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.21□□□□□ -0.3
RPL39P62891 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.21□□□□□ -0.3
RPL39P62891 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
RPL39P62891 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.21□□□□□ -0.3
RPL39P62891 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
RPL39P62891 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL39P62891 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.3
RPL39P62891 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RPL39P62891 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL39P62891 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RPL39P62891 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms