Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL499627.1-201ENST00000569373 2188 ntBASIC16.89■□□□□ 0.29
RPS4XP62701 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPS4XP62701 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4XP62701 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4XP62701 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.88■□□□□ 0.29
RPS4XP62701 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS4XP62701 MIR1238-201ENST00000408483 83 ntBASIC16.88■□□□□ 0.29
RPS4XP62701 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RPS4XP62701 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.88■□□□□ 0.29
RPS4XP62701 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS4XP62701 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 AC145285.6-201ENST00000604632 637 ntBASIC16.88■□□□□ 0.29
RPS4XP62701 AP000525.1-201ENST00000608286 694 ntBASIC16.88■□□□□ 0.29
RPS4XP62701 AC005363.2-201ENST00000618631 242 ntBASIC16.88■□□□□ 0.29
RPS4XP62701 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RPS4XP62701 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RPS4XP62701 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPS4XP62701 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4XP62701 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4XP62701 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RPS4XP62701 KRT8P45-201ENST00000414328 1447 ntBASIC16.87■□□□□ 0.29
RPS4XP62701 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RPS4XP62701 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RPS4XP62701 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS4XP62701 RN7SL850P-201ENST00000579959 291 ntBASIC16.87■□□□□ 0.29
RPS4XP62701 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
RPS4XP62701 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4XP62701 AL357033.4-201ENST00000617703 1807 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 FSCN1P1-201ENST00000568912 1481 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 RCC2P3-201ENST00000418112 1537 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RPS4XP62701 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.86■□□□□ 0.29
RPS4XP62701 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.86■□□□□ 0.29
RPS4XP62701 NAPSB-206ENST00000562112 1266 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.86■□□□□ 0.29
RPS4XP62701 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.86■□□□□ 0.29
RPS4XP62701 AP000692.2-201ENST00000608391 879 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.86■□□□□ 0.29
RPS4XP62701 MYC-208ENST00000641036 567 ntBASIC16.86■□□□□ 0.29
RPS4XP62701 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RPS4XP62701 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPS4XP62701 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
RPS4XP62701 AC096733.2-201ENST00000609937 1394 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms