Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN20P56880 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLDN20P56880 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 ECEL1P2-202ENST00000465689 757 ntBASIC17.12■□□□□ 0.33
CLDN20P56880 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN20P56880 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 KRT18P22-201ENST00000402024 1347 ntBASIC17.12■□□□□ 0.33
CLDN20P56880 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN20P56880 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN20P56880 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN20P56880 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN20P56880 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 SLC25A1P2-201ENST00000430693 912 ntBASIC17.11■□□□□ 0.33
CLDN20P56880 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CLDN20P56880 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN20P56880 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN20P56880 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN20P56880 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN20P56880 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN20P56880 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 NOC2LP2-201ENST00000407594 1944 ntBASIC17.1■□□□□ 0.33
CLDN20P56880 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLDN20P56880 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN20P56880 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLDN20P56880 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN20P56880 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.1■□□□□ 0.33
CLDN20P56880 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN20P56880 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN20P56880 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN20P56880 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 AL023803.3-201ENST00000615559 522 ntBASIC17.1■□□□□ 0.33
CLDN20P56880 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLDN20P56880 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN20P56880 AC141586.3-201ENST00000562166 1838 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms